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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911544.1_cds_XP_016461528.1_54839
CDS Infomation

[gene=LOC107784854] [db_xref=GeneID:107784854] [protein=metal-nicotianamine transporter YSL1-like isoform X4] [protein_id=XP_016461528.1] [location=join(53136..53496,53601..53773,54241..54335,54426..54560,54996..55185,55284..55398,56041..56969)] [gbkey=CDS]
Sequence

ATGAATAACAATACAGAACTAGAGCAAGTTCGCGATTTGGCTGTAGTGGAACATGAGGAG
GAGGAACAATTGTCCGAGAGTACGATGAGAATTCAACCATGGACTAAACAGATCACGTTA
CGAGGAGTCATTGCTAGTACGATAATCGGATGCATTTACAGTGTGATACAAATGAAAATG
AATCTCACAACTGGAATTAATCCTAATCTCAATGTCTCAGCTGCTCTTCTTGCTTATATT
TTCATTCAGACATGGACCAAGATTGTTAAAATGCTTGGTTTTGTCTCTGTTCCTTTTACT
AGACAGGAAAATACTATGATACAAACATGTTCTGTTGCATGTTACAGCATTGCTCTTGGA
GGTGGATTAGGATCTTATTTATTGGGAATGGACAAGAAAACTTATGAGTTAGCTGGTGTT
GGTACAATGGGAAATACATCAAACAGTTATAAAAAACTTGAGATTGGTTGGATGATTGGC
TATCTTTTAGTAGTTTGTTTTATTGGCCTTTTCGTATTGGTTCCTCTTCGAAAGGTGTTG
ATAGTGGATTATAAGTTGACATTTCCAACTGGAATGGCTACTGCAGTTCTTATTAATGGT
TTTCATGGGAAGAGTGATAAACTAGCTAGAAAACAAGTGAAGTGTTTCCTCAAGTTTTTT
AGCTATAGTTTTTCATGGGCTTTCTTTCAGTGGTTTTATACTGGCAAAGAGGATTGTGGA
TTCCAACAGTTTCCTACTTTTGGATTGAAAGCCTGGAAACAAACATTTTACTTTGATTTT
AGCTTAACTTATGTGGGAACTGGAATGATATGTCCTCATATAGTGAACATATCATTGCTT
CTTGGAGCTGTTCTTTCATGGGGTGTAATGTGGCCTCTTATAGCAAAACTTAAAGGAGAA
TGGTTCCCTGCTGATATACCTGAATCCAGTATGAAAAGCCTTAATGGTTACAAGGTCTTC
ATCTCCATTGCCCTCCTACTTGGTGACGGCCTTTACAATTTTGCCAAGATAATGTACTTC
ACACTAGGCAGTGTTCATGAAAGATTCAAACACAAAAACCAAACTCCAGCAGCTGGGGTG
AGACAGAACAAGAACTCAGGGGATGTAAAATATGATGAAGCCTTTGTTAGAGAAAGCATT
CCAATGTGGTTTGGAGGCGTAGGGTATTTAGCCTTGGGAACTATTGCTGTGATTATGATA
CCATTAATTTTCCATGAGATCAAATGGTATTGGGTTATCATAGCCTATCTTTTTGCTCCA
TCTTTAGCTTTCTGCAACGCGTATGGTTCTGGTTTGACTGATATAAACATGGCCTATAAC
TATGGCAAAGTTGGACTTTTTATGATGGCTGCATTGGCTGGTAAAGAACATGGTGTTATT
GCTGGTTTAGCTGGTTGTGGTTTGATCAAGTCTGTGGTTAACATTTCTTGCATTCTGATG
CAAGATTTTAAGACAGGGCACTTAACTTTGACATCTCCAAAAACTATGTTTCTAAGCCAA
GCTATTGGCACAGCTTTAGGATGTGTGATTGGGCCACTAAGTTTCTTCTTGTTCTACAAT
GCCTTTGATATTGGCAACCCTAATGGTGAATTCAAGGCTCCTTATGCACTGATTTATCGA
AATATGGCGATTCTTAGCGTTCAAGGTGTCTCGGCTTTGCCTCAACACTGTTTGCAGCTG
TGTTATGGCTTCTTTGCATTTGCTGTTGCAATAAACTTGGTGAAAGATCTTTCTCCAGAG
AAGATAGGGAAGTGGATGCCATTGCCTATGGCGATGGCGGTGCCTTTTCTAATTGGTGGA
TATTTTGGTATTGATATGTGCATAGGTAGTCTGGTTGTATTTGTATGGCATAAACTTAAC
TCAAAGAAGGCTAAGGTGATGGTTCCAGCGGTTGCTTCTGGTTTGATCTGTGGAGAAGGT
TTATGGATTCTTCCTGCATCTATTCTTGCTTTGGCCAGAGTAACTCCTCCCATCTGCATG
AAATTCTTGGCTTCTTAA

Peptide Sequence

PEP ID

XP_016461528.1
PEP Infomation

PREDICTED: metal-nicotianamine transporter YSL1-like isoform X4 [Nicotiana tabacum]
Sequence

MNNNTELEQVRDLAVVEHEEEEQLSESTMRIQPWTKQITLRGVIASTIIGCIYSVIQMKM
NLTTGINPNLNVSAALLAYIFIQTWTKIVKMLGFVSVPFTRQENTMIQTCSVACYSIALG
GGLGSYLLGMDKKTYELAGVGTMGNTSNSYKKLEIGWMIGYLLVVCFIGLFVLVPLRKVL
IVDYKLTFPTGMATAVLINGFHGKSDKLARKQVKCFLKFFSYSFSWAFFQWFYTGKEDCG
FQQFPTFGLKAWKQTFYFDFSLTYVGTGMICPHIVNISLLLGAVLSWGVMWPLIAKLKGE
WFPADIPESSMKSLNGYKVFISIALLLGDGLYNFAKIMYFTLGSVHERFKHKNQTPAAGV
RQNKNSGDVKYDEAFVRESIPMWFGGVGYLALGTIAVIMIPLIFHEIKWYWVIIAYLFAP
SLAFCNAYGSGLTDINMAYNYGKVGLFMMAALAGKEHGVIAGLAGCGLIKSVVNISCILM
QDFKTGHLTLTSPKTMFLSQAIGTALGCVIGPLSFFLFYNAFDIGNPNGEFKAPYALIYR
NMAILSVQGVSALPQHCLQLCYGFFAFAVAINLVKDLSPEKIGKWMPLPMAMAVPFLIGG
YFGIDMCIGSLVVFVWHKLNSKKAKVMVPAVASGLICGEGLWILPASILALARVTPPICM
KFLAS

Transcript Sequence

Gene sequence data has not been registered.